Keto Pumpkin Cheesecake Bars – Low Carb, Gluten-Free, THM S

Delicious low carb pumpkin cheesecake bars with pecan crust and creamy filling

Welcome, pumpkin lovers! If you adore fall flavors but want to keep things low carb, these keto pumpkin cheesecake bars are calling your name. With a crunchy pecan crust and a dreamy pumpkin‑spiced cheesecake layer, you get that autumn magic in a sugar‑free, gluten‑free, and grain‑free package that’s totally Trim Healthy Mama approved.

Here, you’ll find everything you need to make these delicious bars: a straightforward 7‑ingredient list, easy step‑by‑step directions with a food processor or blender, perfect baking temps (350°F), insider tips for that flawless texture, smart swaps for nuts and sweeteners, plus storage and freezing hacks. The recipe makes a 9×13 pan—that’s about 18 bars. It takes around 55 minutes plus chilling time, and each slice has just about 2 net carbs. Trust me, you’re going to want these on your fall dessert rotation!

What You Need for Both Layers

Homemade pecan crust with creamy pumpkin cheesecake filling for fall dessert.

  • 2 cups pecans
  • 2 tbsp butter
  • 2 tbsp Joy Filled Eats Sweetener (or see alternatives in recipe notes)
  • 16 oz cream cheese
  • 1 cup pumpkin
  • 4 eggs
  • 2/3 cup Joy Filled Eats Sweetener (or see alternatives in recipe notes)
  • 2 tsp pumpkin spice

How to Make the Bars

  1. Preheat oven to 350°F and line a 9 x 13 pan with parchment paper.
  2. Place pecans, butter, and sweetener in a food processor or blender and pulse until the nuts are finely chopped but not oily.
  3. Press the pecan mixture firmly and evenly into the bottom of the prepared pan.
  4. Bake the crust for 10 minutes until lightly toasted.
  5. Without cleaning the food processor, add cream cheese and pulse until smooth, scraping the sides as needed.
  6. Add pumpkin, eggs, sweetener, and pumpkin spice to the processor and blend until the filling is silky smooth.
  7. Pour and spread the filling evenly over the hot crust.
  8. Bake the bars for 35 minutes, until the edges are golden and the center still jiggles slightly when shaken.

    Delicious low carb pumpkin cheesecake bars with pecan crust, perfect for fall.

  9. Cool the bars completely on a wire rack to room temperature.
  10. Refrigerate the cooled bars for at least 3–4 hours to set, then slice into 18 bars.

Expert Tips for Perfect Results

  • Use full-fat cream cheese straight from the fridge, then let it soften at room temperature before blending — this helps you get that creamy, lump-free filling.
  • Pulse the pecans good and fine, but don’t turn them into paste. A sandy texture presses easier into a crisp crust.
  • Firmly press the crust evenly into the pan with the bottom of a cup or your fingers so the bars hold together well after baking.
  • Keep an eye on the baking time. Pull the bars when edges are set but center still jiggles slightly to avoid cracking and overbaking. For a clear visual of the jiggle you’re aiming for, see the pumpkin cheesecake (no water bath) method.
  • Cool the bars fully to room temp before refrigerating 3-4 hours or overnight—this gives you clean, neat slices.
  • Line the pan with parchment paper that extends over the edges for easy lifting and tidy cutting.
  • If trying different sweeteners, follow the recipe’s substitution notes to keep the texture and sweetness just right; for more on choosing keto-friendly sweeteners in cheesecake, see Keto Pumpkin Cheesecake.
  • When serving after chilling, let the bars sit out for 10-15 minutes so any condensation evaporates and the flavors shine.

Flavor Swaps and Add-Ins

  • Swap pecans with walnuts for a deep, earthy flavor or almonds if you want something a little milder and subtly sweet.
  • Try an almond flour crust made with 1 1/2 cups almond flour, 2-3 tbsp melted butter, and 1-2 tbsp sweetener pressed and baked the same way.
  • Want mini treats? Use a lined muffin tin to divide the crust and filling into individual portions and bake for just 18-22 minutes.
  • Add a splash of vanilla extract, a tablespoon of sugar-free maple syrup, or a pinch more ginger to the filling for more warmth and depth, or go for a marbled look like these Swirled Pumpkin Cheesecake Bars.
  • Top with chopped toasted pecans, a dusting of powdered erythritol, or drizzle a little sugar-free caramel before serving for extra indulgence.
  • If you need dairy-free, swap the cream cheese for a firm dairy-free alternative and use coconut oil in the crust. Just know the flavor and texture will be a bit different.

How to Store and Make Ahead

Delicious low-carb pumpkin cheesecake bars with pecan crust, perfect for fall dessert.

Cover and refrigerate the bars in an airtight container for 4–5 days. For the cleanest slices, let them chill at least 6 hours (or overnight) before cutting.

To make ahead, bake and cool completely, then cover and refrigerate up to 2 days before serving. For longer storage, wrap individual bars tightly and freeze for up to 2 months; thaw overnight in the refrigerator.

Planning a fall brunch? Pair these with Pumpkin Cinnamon Rolls (Make Right Now or Make Ahead) for another dessert you can prep in stages.

Answers to Common Questions

Q: Can I use fresh pumpkin puree instead of canned? A: Absolutely! Fresh pumpkin works just fine, though it can be a bit wetter and less intense in flavor. Just drain any extra liquid and measure by volume to get the same results.

Q: Why did my bars crack? A: Usually that means they were overbaked. Remove the bars when the edges are set but the center still jiggles slightly. Cooling gradually and refrigerating before slicing also helps keep cracks away.

Q: How long do these bars stay good and can I freeze them? A: Store them airtight in the fridge for 3-4 days. They freeze well, too, for up to 2 months if you use a sealed container. Thaw them in the fridge before serving.

Q: What sweeteners can I swap in? A: Follow the recipe notes to swap sweeteners. For Swerve or Lakanto, use 1.5 times the amount. For Pyure or strong stevia blends, use half. This keeps your bars tasting just right.

Q: Can I make these nut-free? A: You can try sunflower seed flour or a seed blend crust to make it nut-free, but expect a change in color and flavor. Press it firmly and pre-bake like the pecan crust.

Q: How many net carbs are in a bar? A: You get about 2 net carbs per bar, with 18 servings total from one batch.

Close-up of a creamy, pumpkin cheesecake bar with a nutty crust, perfect for fall.

Print

Low carb, gluten-free pumpkin cheesecake bars with a crunchy pecan crust and creamy pumpkin filling. Perfect for fall, these bars are sugar-free, grain-free, and Trim Healthy Mama approved.

  • Author: Margo Bennett
  • Prep Time: 10 minutes
  • Cook Time: 45 minutes
  • Total Time: 55 minutes
  • Yield: 18 bars 1x
  • Category: Dessert
  • Cuisine: American

Ingredients

Scale
  • 2 cups pecans
  • 2 tbsp butter
  • 2 tbsp Joy Filled Eats Sweetener (or see alternatives in recipe notes)
  • 16 oz cream cheese
  • 1 cup pumpkin
  • 4 eggs
  • 2/3 cup Joy Filled Eats Sweetener (or see alternatives in recipe notes)
  • 2 tsp pumpkin spice

Instructions

  1. Preheat your oven to 350°F and line a 9 x 13 pan with parchment paper for easy removal.
  2. Place the pecans, butter, and sweetener into a food processor or blender. Pulse until the nuts are finely chopped but not oily.
  3. Press the pecan mixture evenly into the bottom of the prepared pan.
  4. Bake the crust for 10 minutes until lightly toasted.
  5. Use the same food processor (no need to clean) to pulse cream cheese until silky smooth, scraping down the sides as needed.
  6. Add pumpkin, eggs, sweetener, and pumpkin spice to the processor and blend until the filling is smooth.
  7. Spread the pumpkin cheesecake filling evenly over the hot crust.
  8. Bake the bars for 35 minutes, or until edges are golden and the center still jiggles slightly when gently shaken.
  9. Cool the bars completely on a wire rack to room temperature.
  10. Refrigerate the cooled bars for at least 3-4 hours to set, then slice into 18 bars.

Notes

Each bar has about 2 net carbs., Store bars chilled in an airtight container in the refrigerator for 3-4 days., Freeze leftover bars in an airtight container for up to 2 months; thaw in fridge before serving., You may substitute pecans with walnuts or almonds for the crust., Sweetener substitutes: for Swerve or Lakanto Monk Fruit use 1.5x amount; for Pyure or strong stevia blends use half the amount., Use full-fat cream cheese softened to room temperature for smooth filling., Press crust firmly and evenly into pan for best results., Remove bars from oven when edges are set but center slightly jiggles to avoid cracking., Let bars sit at room temperature 10-15 minutes before serving to enhance flavor and reduce condensation., Nut-free crust substitute: use sunflower seed flour or seed blend crust, pressed and pre-baked like pecan crust., Fresh pumpkin puree can be used but drain extra liquid before measuring.

Nutrition

  • Serving Size: 1 bar
  • Calories: 190
  • Fat: 19g
  • Carbohydrates: 3g
  • Protein: 4g

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Margo Bennett

ABOUT THE AUTHOR

Margo Bennett

Hi, I’m Margo Bennett, the home cook behind Margo Recipes. I created this website for people who enjoy comforting homemade food but do not want recipes that feel complicated or intimidating. Here, you’ll find approachable dishes made with familiar ingredients, clear instructions, and plenty of practical tips. My kitchen is where I test cozy soups, seasonal desserts, pumpkin favorites, fruit butters, simple breads, and family-style recipes worth making more than once. I believe good food does not have to be perfect. It simply needs to taste delicious, bring people together, and make everyday moments feel a little more special.

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